The Estonian Journal of Ecology is an international scientific journal published by the Estonian Academy of Sciences in collaboration with the University of Tartu, Tallinn University of Technology, Tallinn University, and the Estonian University of Life Sciences.

The journal publishes primary research and review papers in the English language. All articles are provided with short Estonian summaries.

All papers to be published in the journal are peer reviewed internationally.

The journal is open for publications in all fields of ecology, including biotic and abiotic environment, interactions between human and natural systems across temporal and spatial scales, in both terrestrial and aquatic ecosystems, past and future changes in the environmental quality, and sustainable use of natural resources

The journal is published quarterly.